> Markdown version of [/jobs/ext/2400018-bioinformatics-workflow-developer](https://www.wearedevelopers.com/jobs/ext/2400018-bioinformatics-workflow-developer). Every page supports `.md` or `Accept: text/markdown`. Links point to the HTML versions so they work for humans too. Agent guide: [/agents.md](https://www.wearedevelopers.com/agents.md).

---

# Bioinformatics Workflow Developer

- **Company:** AstrixTechnology LLC
- **Location:** South San Francisco, CA, United States
- **Experience:** Experienced
- **Salary:** $83,200.0 - $93,600.0
- **Contract:** Temporary contract
- **Skills:** Artificial Intelligence, Bioinformatics, Computational Biology, Linux, R (Programming Language), Python (Programming Language), Cloud Platform System, High Performance Computing, Bioconductor, Large Language Models, Jupyter, Git, Pandas, Scikit Learn, Data Management, Code Restructuring, Docker
- **Published:** August 13, 2026
- **Apply:** https://www.techcareers.com/job.asp?id=3351752115&tx=FJ5552FFL&pt=1&aff=0B19D771-A501-4A5E-8338-2A822B784D54&utm_source=Job%20Feed&utm_medium=textkernel&utm_campaign=DE&utm_term=0B19D771-A501-4A5E-8338-2A822B784D54

## About the Role

* Bachelor's degree or higher in Bioinformatics, Computational Biology, Genomics, Systems Biology, Statistics , or a related field.
 * MUST be authorized to work for a US employer without sponsorship.
 * 2-5+ years of experience working with large-scale biological or clinical datasets.
 * Strong Python and/or R skills; experience with Scanpy, AnnData, Pandas, scikit-learn, ggplot2, and/or Bioconductor.
 * Hands-on experience with Nextflow, WDL, CWL, or Snakemake.
 * Experience with Linux, HPC, Git, and cloud environments.
 * Familiarity with AI/LLM-assisted development, including agentic coding or automated refactoring.
 * Knowledge of FAIR data principles and containerization using Docker, Singularity, or Apptainer.
 * Strong problem-solving, communication, and cross-functional collaboration skills.

## Description

This role will develop and optimize reproducible, scalable bioinformatics workflows for large-scale biological datasets, working closely with computational scientists, biomarker researchers, and experimental biologists., * Develop, maintain, and productionize bioinformatics workflows using Nextflow, WDL, CWL, or Snakemake.

 * Analyze bulk and single-cell transcriptomic and epigenetic datasets, including RNA-seq, GWAS, proteomics, and perturbational data.
 * Build computational tools, libraries, statistical models, and visualizations to support biological research.
 * Deploy workflows across HPC and cloud environments.
 * Leverage AI/LLM tools and agentic coding workflows to improve development and analysis efficiency.
 * Communicate computational findings through Jupyter/R Notebooks, visualizations, and presentations.
 * Maintain strong standards for reproducibility, documentation, and data stewardship.


## Related Videos

- [Docker network without Docker](https://www.wearedevelopers.com/videos/1418-docker-network-without-docker)
- [How a Small Team Shrank a Microsoft Monorepo by 94%](https://www.wearedevelopers.com/videos/1236-how-a-small-team-shrank-a-microsoft-monorepo-by-94)
- [Docker Compose: Rediscovered](https://www.wearedevelopers.com/videos/1978-docker-compose-rediscovered)
- [Alibaba Big Data and Machine Learning Technology](https://www.wearedevelopers.com/videos/37-alibaba-big-data-and-machine-learning-technology)
- [Docker exec without Docker](https://www.wearedevelopers.com/videos/1094-docker-exec-without-docker)
- [Docker build without Docker](https://www.wearedevelopers.com/videos/100114-docker-build-without-docker)

## Related Articles

- [Highest Paying Tech Companies for Developers](https://www.wearedevelopers.com/magazine/220-highest-paying-tech-companies-for-developers)
- [Navigating the AI Shift](https://www.wearedevelopers.com/magazine/629-navigating-the-ai-shift)
- [How to Become an AI Engineer](https://www.wearedevelopers.com/magazine/331-how-to-become-an-ai-engineer)
- [Dev Digest 121 - AI goes offline](https://www.wearedevelopers.com/magazine/456-dev-digest-121-ai-goes-offline)
- [Why Upskilling And Reskilling is Important For Developers](https://www.wearedevelopers.com/magazine/428-why-upskilling-and-reskilling-is-important-for-developers)
- [Dev Digest 132 - Binging WADFlix?](https://www.wearedevelopers.com/magazine/473-dev-digest-132-binging-wadflix)